The detailed information of tRNA gene sequence


Sequence ID>W09109655
Genome IDABUK01000001
Search identical group
Phylum/ClassPlanctomycetota
SpeciesPlanctopirus limnophila DSM 3776 [ABUK]
Start position on genome 5311864
End posion on genome 5311777
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ccttcgcggt
tRNA gene sequence 
GGAGAGGTGACAGAGCGGTTGATTGTGCCGGTCTCGAAAACCGGTGTACCCGCAAGGGTA
CCGGGGGTTCGAATCCCCCCCTCTCCGCtc
Downstream region at tRNA end position 
ctattgcagt
Secondary structure (Cloverleaf model)
>W09109655	Ser	CGA
                   t      GCtc ctattgcagt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      C G A        G      | | | | |     G
    G       G A C A       G G G G G     C
    G       + | | |                 T T
    T       T T G T
      T G A        G     TGTACCCGCAAGGGTACC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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