The detailed information of tRNA gene sequence


Sequence ID>C191144269
Genome IDCP035510
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesHaematobacter massiliensis OT1 [CP035510]
Start position on genome 1092633
End posion on genome 1092538
Amino Acid Sec
Anticodon TCA
Upstream region at tRNA start position 
cattgcgttg
tRNA gene sequence 
GGAGGAGCAGCGTCCCTGGTGGGGCGGCCGGACTTCAACTCCGGTTGGGGCAGCGAGCCT
GTCCCGGGTGGGTTCGACTCCCATTCTCCTCCGCCA
Downstream region at tRNA end position 
cgcagccgga
Secondary structure (Cloverleaf model)
>C191144269	Sec	TCA
                   g      GCCA cgcagccgga
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     C   T          T C
                    A     T A C C C     A
      T C C        G      + | | | |     G
    G       C T G C       G T G G G     C
    G       | + | |                 T T
    T       G G C G
      G G          G     TTGGGGCAGCGAGCCTGTCCCGG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       C
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.-

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