The detailed information of tRNA gene sequence


Sequence ID>C191160490
Genome IDCP038492
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRhodophyticola sp. CCM32 [CP038492]
Start position on genome 189528
End posion on genome 189617
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccccgccgat
tRNA gene sequence 
GGAGACGTGGCCGAGTGGTCGAAGGCGCTCCCCTGCTAAGGGAGTAGGCGAGGAATCGTC
TCGAGGGTTCGAATCCCTTCGTCTCCGCCA
Downstream region at tRNA end position 
cccaccattt
Secondary structure (Cloverleaf model)
>C191160490	Ser	GCT
                   t      GCCA cccaccattt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T T C C C     A
      T G A        G      + | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TAGGCGAGGAATCGTCTC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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