The detailed information of tRNA gene sequence


Sequence ID>C191174031
Genome IDCP040017
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesPseudoduganella umbonata DSMZ 26121 [CP040017]
Start position on genome 770533
End posion on genome 770438
Amino Acid Sec
Anticodon TCA
Upstream region at tRNA start position 
cgtagtccaa
tRNA gene sequence 
GGAAGGCATTCTCATCCGGTGATGGGGCCGGGCTTCAAACCCGGTGAGGGGCGTCAGCCG
TTCCTCTGTAAGTTCGACTCTTTCTGCCTTCCGCCA
Downstream region at tRNA end position 
atttccccgc
Secondary structure (Cloverleaf model)
>C191174031	Sec	TCA
                   a      GCCA atttccccgc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     C - G
                     A - T          T C
                    T     C T T T C     A
      C C T        T      |   | | |     G
    G       A C T C       G T A A G     C
    G       | | + |                 T T
    T       T G G G
      G A          G     TGAGGGGCGTCAGCCGTTCCTCT
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.-

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