The detailed information of tRNA gene sequence


Sequence ID>C191174180
Genome IDCP040021
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesSalinivibrio kushneri AL184 [CP040021, CP040022]
Start position on genome 393778
End posion on genome 393853
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cattccattc
tRNA gene sequence 
GGCCCCTTAGCTCAGTGGTTAGAGCAGTCGACTCATAATCGATTGGTCCCCAGTTCAAGT
CTGGGAGGGGCCACCA
Downstream region at tRNA end position 
gatatagcaa
Secondary structure (Cloverleaf model)
>C191174180	Met	CAT
                   c      ACCA gatatagcaa
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T G
                    T     G G G T C     A
      T G A        A      | | | | |     A
    G       C T C G       C C C A G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     TGGTC
                    G + T
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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