The detailed information of tRNA gene sequence


Sequence ID>C191176580
Genome IDCP040325
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRickettsia parkeri Atlantic Rainforest [CP040325]
Start position on genome 1282749
End posion on genome 1282673
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
taaatgttta
tRNA gene sequence 
GCATCCTTAGCTCAGCTGGATAGAGCAACAGATTTCTAATCTGTGGGTCAGAGGTTCGAA
TCCTTTAGGGTGCGCCA
Downstream region at tRNA end position 
ttctgcattt
Secondary structure (Cloverleaf model)
>C191176580	Arg	TCT
                   a      GCCA ttctgcattt
                     G - C
                     C - G
                     A - T
                     T + G
                     C - G
                     C - G
                     T - A          T A
                    T     T T T C C     A
      C G A        A      | + | | |     G
    T       C T C G       A G A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     GGGTC
                    A - T
                    C - G
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.-

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