The detailed information of tRNA gene sequence


Sequence ID>C191179179
Genome IDCP040551
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesBurkholderia pseudomallei VB2514 [CP040551, CP040552]
Start position on genome 560278
End posion on genome 560203
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttcgttttta
tRNA gene sequence 
GGGCCTGTAGCTCAGGGGTTAGAGCAGTCGACTCATAATCGATTGGTCGCGGGTTCGAAA
CCCGCCGGGCCCACCA
Downstream region at tRNA end position 
tatttttcta
Secondary structure (Cloverleaf model)
>C191179179	Met	CAT
                   a      ACCA tatttttcta
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          A A
                    T     C G C C C     A
      G G A        A      | | | | |     G
    G       C T C G       G C G G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     TGGTC
                    G + T
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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