The detailed information of tRNA gene sequence


Sequence ID>C191179252
Genome IDCP040555
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema pallidum subsp. pallidum X-4 [CP040555]
Start position on genome 1080288
End posion on genome 1080203
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
gccgcacaac
tRNA gene sequence 
GCTGGAGTGATGGAATTGGTAGACATCAGGGACTTAAAATCCCTTGACCGGCAGCGGTCG
TACGAGTTCAAGTCTCGTCTCCAGCAacc
Downstream region at tRNA end position 
cactgcgccc
Secondary structure (Cloverleaf model)
>C191179252	Leu	TAA
                   c      Aacc cactgcgccc
                     G - C
                     C - G
                     T - A
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     T G C T C     A
      T A A        G      | | | | |     A
    T       G G T A       A C G A G     C
    G         | | |                 T T
    G       A C A T
      T A G        C     TGACCGGCAGCGGTCGT
                    A - T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.-

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