The detailed information of tRNA gene sequence


Sequence ID>C191211009
Genome IDLR134409
Search identical group
Phylum/ClassActinomycetota
SpeciesKocuria rhizophila NCTC8340 [LR134409]
Start position on genome 1973204
End posion on genome 1973110
Amino Acid Sec
Anticodon TCA
Upstream region at tRNA start position 
attcggccgc
tRNA gene sequence 
GGAGGCGTCCGTGTCCTGGTGGGCGCCCCGGTCTTCAAAACCGGTGAGACCGAGCACCTC
GGTCTGGCGGGTTCGATTCCCGTCCGCCTCCGCCA
Downstream region at tRNA end position 
acctttcgag
Secondary structure (Cloverleaf model)
>C191211009	Sec	TCA
                   c      GCCA acctttcgag
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     T   C          T T
                    C     T G C C C     A
      T C C        C      + | | | |     G
    G       T G T G       G C G G G     C
    G       + | + |                 T T
    T       G C G C
      G G          C     TGAGACCGAGCACCTCGGTCTG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.-

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