The detailed information of tRNA gene sequence


Sequence ID>C191213103
Genome IDLR134506
Search identical group
Phylum/ClassBacteroidota
SpeciesPorphyromonas cangingivalis NCTC12856 [LR134506]
Start position on genome 35859
End posion on genome 35947
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gacattgttt
tRNA gene sequence 
GGAGAGATGCTCGAGTGGTTGAAGAGGCACGCCTGGAAAGCGTGTATACGCCAAAAGCGT
ATCGCGGGTTCGAATCCCGCTTTCTCCGCag
Downstream region at tRNA end position 
atttatttcg
Secondary structure (Cloverleaf model)
>C191213103	Ser	GGA
                   t      GCag atttatttcg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G + T
                     A - T          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C T C       G C G G G     C
    G         | | |                 T T
    T       A G A G
      T G A        G     TATACGCCAAAAGCGTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.-

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