The detailed information of tRNA gene sequence


Sequence ID>C191213716
Genome IDLR134518
Search identical group
Phylum/ClassCampylobacterota
SpeciesHelicobacter cholecystus NCTC13205 [LR134518]
Start position on genome 282197
End posion on genome 282295
Amino Acid Sec
Anticodon TCA
Upstream region at tRNA start position 
aattttattT
tRNA gene sequence 
GGAGGGTAAGCGATTCTGGTGTTCGCCTTGGGCTTCAAACCCATAGAGTGATTAGGTGTC
TAATTGCTGGGGAGTTCGATTCTCTCACCTTCTCGCC
Downstream region at tRNA end position 
Aaatatgatt
Secondary structure (Cloverleaf model)
>C191213716	Sec	TCA
                   T      CGCC Aaatatgatt
                     G + T
                     G - C
                     A - T
                     G + T
                     G - C
                     G - C
                     T - A          T T
                    A     C T C T C     A
      C T T        A      | + | | |     G
    T       A G C G       G G G A G     C
    G       | | | |                 T T
    G       T C G C
      T G T        C     AGAGTGATTAGGTGTCTAATTGCTG
                    T   T
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.-

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