The detailed information of tRNA gene sequence


Sequence ID>C191226154
Genome IDLS999205
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesPseudomonas protegens CHA0 [LS999205]
Start position on genome 5161395
End posion on genome 5161319
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
tcgctgtttt
tRNA gene sequence 
GTCTCAGTAGCTCAATTGGATAGAGCATCCCCCTCCTAAGGGGAAGGTTGGCAGTTCGAA
CCTGCCCTGGGACACCA
Downstream region at tRNA end position 
tataattcgt
Secondary structure (Cloverleaf model)
>C191226154	Arg	CCT
                   t      ACCA tataattcgt
                     G - C
                     T - A
                     C - G
                     T + G
                     C - G
                     A - T
                     G - C          C A
                    T     C C G T C     A
      T A A        A      | | | | |     G
    T       C T C G       G G C A G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGTT
                    T - A
                    C - G
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.-

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