The detailed information of tRNA gene sequence


Sequence ID>W09125393
Genome IDACIJ01000064
Search identical group
Phylum/ClassBacteroidota
SpeciesAlloprevotella tannerae ATCC 51259 [ACIJ]
Start position on genome 3506
End posion on genome 3418
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
acaaagccaa
tRNA gene sequence 
GGAGAGGTGCTCGAGTGGCTGAAGAGGCACGCCTGGAAAGCGTGTAAACGTCAAAAGCGT
TTCGGGGGTTCGAATCCCTCTCTCTCCGCtg
Downstream region at tRNA end position 
gaagtactct
Secondary structure (Cloverleaf model)
>W09125393	Ser	GGA
                   a      GCtg gaagtactct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G C T C       G G G G G     C
    G         | | |                 T T
    C       A G A G
      T G A        G     TAAACGTCAAAAGCGTTTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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