The detailed information of tRNA gene sequence


Sequence ID>W09101940
Genome IDAAHD01000006
Search identical group
Phylum/ClassMyxococcota
SpeciesAnaeromyxobacter dehalogenans 2CP-C [AAHD]
Start position on genome 142653
End posion on genome 142557
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
acccgatccc
tRNA gene sequence 
GGCAGAGCGTCCTAGGCTGGTGCCGGGCCCGGTCTTCAAAACCGGTGGATGGTGCTGAGA
GGCGCTGTCGGAGGGTTCGATTCCCTTGCTCTGCCGCtt
Downstream region at tRNA end position 
tcccgggttt
Secondary structure (Cloverleaf model)
>W09101940	SeC	TCA
                   c      GCtt tcccgggttt
                     G - C
                     G - C
                     C - G
                     A - T
                     G - C
                     A - T
                     G - C
                     C - G          T T
                    G     T T C C C     A
      C G G        T      + | | | |     G
    T       A T C C       G A G G G     C
    G         + | |                 T T
    G       C G G G
      T G C        C     TGGATGGTGCTGAGAGGCGCTGTCG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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