The detailed information of tRNA gene sequence


Sequence ID>W09102602
Genome IDAAIA01000013
Search identical group
Phylum/ClassBacillota
SpeciesListeria innocua TTU_473 [AAIAKO]
Start position on genome 99836
End posion on genome 99743
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
cactgaatcc
tRNA gene sequence 
GGAAGCGTATTTCATCCGGTGGTGGGCGTGGTCTTCAAAACCACTGAGCGGCCGCAAAGC
CGCTGATCGGTTCGACTCCGATACGCTTCCGCCA
Downstream region at tRNA end position 
ctaactttcg
Secondary structure (Cloverleaf model)
>W09102602	SeC	TCA
                   c      GCCA ctaactttcg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C
                     T - A          T C
                    A     T A G C C     A
      C C T        T      | | | | |     G
    G       A C T T       A T C G G     C
    G       | | + +                 T T
    T       T G G G
      G G          C     TGAGCGGCCGCAAAGCCGCTG
                    G - C
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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