The detailed information of tRNA gene sequence


Sequence ID>W09117970
Genome IDACCN01000001
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesMaridesulfovibrio salexigens DSM 2638 [ACCN]
Start position on genome 785302
End posion on genome 785209
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tcttcgaagc
tRNA gene sequence 
GGAAGTGTATCGTAACCGGTGTTGCGCCTGGACTTCAAATCCAGTGGACGGGTTAACCCT
CGTCGGTAGGTTCGACTCCTATACACTTCCGCCA
Downstream region at tRNA end position 
gatatttcca
Secondary structure (Cloverleaf model)
>W09117970	SeC	TCA
                   c      GCCA gatatttcca
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     T - A          T C
                    A     T A T C C     A
      C C A        T      + | | | |     G
    G       A T G C       G T A G G     C
    G       | + | |                 T T
    T       T G C G
      G T          C     TGGACGGGTTAACCCTCGTCG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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