The detailed information of tRNA gene sequence


Sequence ID>W09118771
Genome IDACDH01000035
Search identical group
Phylum/ClassFusobacteriota
SpeciesFusobacterium ulcerans ATCC 49185 [ACDH]
Start position on genome 47861
End posion on genome 47955
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
aaaggaaaat
tRNA gene sequence 
GGTGGCGGAGGAGAACTGGTGTTTTCAGCAGTCTTCAAAACTGTCGTGGTGGCTGTAAAG
TCATTGGTAGGTTCGATTCCTACACGCTACCGCCA
Downstream region at tRNA end position 
taagaaaata
Secondary structure (Cloverleaf model)
>W09118771	SeC	TCA
                   t      GCCA taagaaaata
                     G - C
                     G - C
                     T - A
                     G + T
                     G - C
                     C - G
                     G - C
                     G   A          T T
                    A     C A T C C     A
      T C A        G      | | | | |     G
    G       A G A G       G T A G G     C
    G       | + | |                 T T
    T       T T T C
      G T          A     CGTGGTGGCTGTAAAGTCATTG
                    G + T
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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