The detailed information of tRNA gene sequence


Sequence ID>W141557398
Genome IDJHVC01000030
Search identical group
Phylum/ClassBacillota
SpeciesClostridium lundense DSM 17049 [JHVC]
Start position on genome 20158
End posion on genome 20068
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tgtaggacat
tRNA gene sequence 
GGAGAAATACTCAAGTGGCCGAAGAGGCGCCCCTGCTAAGGGCGTAGGTCGGGTAACCGG
CGCGAGGGTTCAAATCCCTCTTTCTCCGCCA
Downstream region at tRNA end position 
gaacatctag
Secondary structure (Cloverleaf model)
>W141557398	Ser	GCT
                   t      GCCA gaacatctag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     A - T          T A
                    T     C T C C C     A
      T G A        A      | | | | |     A
    G       A C T C       G A G G G     C
    G         | | |                 T T
    C       A G A G
      C G A        G     TAGGTCGGGTAACCGGCGC
                    C - G
                    G - C
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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