The detailed information of tRNA gene sequence


Sequence ID>W141561012
Genome IDJHYB01000004
Search identical group
Phylum/ClassMycoplasmatota
SpeciesHaploplasma modicum ATCC 29102 [JHYB]
Start position on genome 52524
End posion on genome 52434
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aaataggcac
tRNA gene sequence 
GGAGAAATACCCAAGCCTGGCTGAAGGGACTAGTCTCGAAAACTAGCAGAGTGTAAAAGC
TGCGAGGGTTCAAATCCCTCTTTCTCCGCCA
Downstream region at tRNA end position 
taataatctt
Secondary structure (Cloverleaf model)
>W141561012	Ser	CGA
                   c      GCCA taataatctt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     A - T          T A
                    T     C T C C C     A
    C C G A        A      | | | | |     A
  T         A C C C       G A G G G     C
  G           | | |                 T T
  G         A G G G
    C T G A        A     CAGAGTGTAAAAGCTGC
                    C - G
                    T - A
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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