The detailed information of tRNA gene sequence


Sequence ID>W141562741
Genome IDJHZK01000048
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesAfifella pfennigii DSM 17143 [JHZK]
Start position on genome 14788
End posion on genome 14880
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttcgggaagt
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTCGAAGGCGCTCCCCTGCTAAGGGAGTAGACGGCTTGAAACC
GTCTCGAGGGTTCGAATCCCTTCCTCTCCGCCA
Downstream region at tRNA end position 
tccctaagcc
Secondary structure (Cloverleaf model)
>W141562741	Ser	GCT
                   t      GCCA tccctaagcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
      T G A        G      + | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TAGACGGCTTGAAACCGTCTC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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