The detailed information of tRNA gene sequence


Sequence ID>W141563988
Genome IDJIAK01000004
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesDesulfovermiculus halophilus DSM 18834 [JIAK]
Start position on genome 49398
End posion on genome 49487
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
attcggtttc
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGCTAAAGGCGGTAGTCTTGAAAACTACTGAGGGTTGACGCCCT
CCGGGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
tggacactga
Secondary structure (Cloverleaf model)
>W141563988	Ser	TGA
                   c      GCCA tggacactga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G C C G       G G G G G     C
    G         | | |                 T T
    C       A G G C
      T A A        G     TGAGGGTTGACGCCCTCC
                    G - C
                    T - A
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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