The detailed information of tRNA gene sequence


Sequence ID>W141564014
Genome IDJIAK01000016
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesDesulfovermiculus halophilus DSM 18834 [JIAK]
Start position on genome 5808
End posion on genome 5732
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
acggcacggt
tRNA gene sequence 
GGCGAGGTAGCTCAGTCGGTCAGAGCATGCGGCTCATATCCGCAGTGTCGGGGGTTCAAG
TCCCTCCCTCGCTACCA
Downstream region at tRNA end position 
atcttcccct
Secondary structure (Cloverleaf model)
>W141564014	Met	CAT
                   t      ACCA atcttcccct
                     G + T
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T G
                    T     C T C C C     A
      T G A        A      | + | | |     A
    C       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        A     GTGTC
                    T - A
                    G - C
                    C - G
                    G - C
                    G - C
                  C       T
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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