The detailed information of tRNA gene sequence


Sequence ID>W141564025
Genome IDJIAK01000030
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesDesulfovermiculus halophilus DSM 18834 [JIAK]
Start position on genome 15432
End posion on genome 15356
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cgtagaatgc
tRNA gene sequence 
GGAGCTGTAGTTAAGCTGGTTATAACGCCGGCCTGTCACGCCGGAGGCCGCCGGTTCGAG
TCCGGTCAGCTCCGCCA
Downstream region at tRNA end position 
ttttttccaa
Secondary structure (Cloverleaf model)
>W141564025	Asp	GTC
                   c      GCCA ttttttccaa
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     T - A
                     G - C          T G
                    T     T G G C C     A
      C G A        A      + | | | |     G
    T       A T T G       G C C G G     C
    G       | | | |                 T T
    G       T A A C
      T T A        G     AGGCC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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