The detailed information of tRNA gene sequence


Sequence ID>W141564649
Genome IDJIAY01000008
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesHalomonas sp. 19A_GOM-1509m [JIAY]
Start position on genome 275819
End posion on genome 275727
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gtgccgttga
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGCTGAAGGCGCTCCCCTGCTAAGGGAGTATAGGGTTTATAGCC
CTATCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
atcgcatggc
Secondary structure (Cloverleaf model)
>W141564649	Ser	GCT
                   a      GCCA atcgcatggc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATAGGGTTTATAGCCCTATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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