The detailed information of tRNA gene sequence


Sequence ID>W09107580
Genome IDABJR01000001
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRhodopseudomonas palustris TIE-1 [ABJR]
Start position on genome 1177336
End posion on genome 1177261
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
cgcctcacgt
tRNA gene sequence 
GAGCGCGTAGCTCAGCCGGTAGAGCACGTGACTTTTAATCATGGGGTCGAGGGTTCGAGT
CCCTCCGCGCTCACCA
Downstream region at tRNA end position 
tgcgccttat
Secondary structure (Cloverleaf model)
>W09107580	Lys	TTT
                   t      ACCA tgcgccttat
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C          T G
                    T     C T C C C     A
      C G A        A      | | | | |     G
    C       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    C - G
                    G + T
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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