The detailed information of tRNA gene sequence


Sequence ID>W09109722
Genome IDABUL01000001
Search identical group
Phylum/ClassRhodothermota
SpeciesRhodothermus marinus DSM 4252 [ABUL]
Start position on genome 417375
End posion on genome 417300
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
ttcgctatgt
tRNA gene sequence 
GCCGCGTTCGTCTAGGGGTCTAGGACGCCAGCCTCTCACGCTGGTAACACGGGTTCGAAT
CCCGTACGCGGTACCA
Downstream region at tRNA end position 
cgcccgccga
Secondary structure (Cloverleaf model)
>W09109722	Glu	CTC
                   t      ACCA cgcccgccga
                     G + T
                     C - G
                     C - G
                     G - C
                     C - G
                     G - C
                     T - A          T A
                    T     T G C C C     A
      G G A        C      | | | | |     G
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    T       G G A C
      C T A        G     TAAC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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