The detailed information of tRNA gene sequence


Sequence ID>W141695317
Genome IDJMCD01000477
Search identical group
Phylum/ClassMyxococcota
SpeciesSandaracinus amylolyticus [JMCD]
Start position on genome 10307
End posion on genome 10214
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
cgtcgcgggt
tRNA gene sequence 
GGAAGTGCATGGCCCGCTGGTGCGGCCCCCGGTCTTCAAAACCGGTGTGGGGCGCGAGAG
CGTCCTGGGCAGGTTCGATTCCTGTGCATTTCCGttt
Downstream region at tRNA end position 
ggtctggtcc
Secondary structure (Cloverleaf model)
>W141695317	SeC(p)	TCA
                   t      Gttt ggtctggtcc
                     G - C
                     G - C
                     A - T
                     A - T
                     G + T
                     T - A
                     G - C
                     C - G          T T
                    A     T G T C C     A
      C G C        T      + | | | |     G
    T       C C G G       G C A G G     C
    G       | | | |                 T T
    G       G G C C
      T G C        C     TGTGGGGCGCGAGAGCGTCCTGG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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