The detailed information of tRNA gene sequence


Sequence ID>W141695546
Genome IDJMEB01000054
Search identical group
Phylum/ClassAcidithiobacillia
SpeciesAcidithiobacillus thiooxidans [JMEB]
Start position on genome 18373
End posion on genome 18462
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ccactgtcac
tRNA gene sequence 
GGAGGTGTGGCAGAGCGGTTGAATGCACCGGTCTTGAAAACCGGCAGGGGTTTGCGCCCC
TCGTGAGTTCGAATCTCACCGCCTCCGCCA
Downstream region at tRNA end position 
ctatcaatag
Secondary structure (Cloverleaf model)
>W141695546	Ser	TGA
                   c      GCCA ctatcaatag
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T + G
                     G - C          T A
                    T     C A C T C     A
      C G A        G      | | | | |     G
    G       G A C G       G T G A G     C
    G         | | |                 T T
    T       A T G C
      T G A        A     CAGGGGTTTGCGCCCCTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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