The detailed information of tRNA gene sequence


Sequence ID>W141695574
Genome IDJMEB01000106
Search identical group
Phylum/ClassAcidithiobacillia
SpeciesAcidithiobacillus thiooxidans [JMEB]
Start position on genome 17479
End posion on genome 17396
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
cctgagagat
tRNA gene sequence 
GCCCAAGTGGTGGAATGGCAGACACGGGGGTTTTAAACGCCCTTGACTTACGTCATGCGG
GTTCAAGTCCCGCCTTGGGTACCA
Downstream region at tRNA end position 
attcgctcct
Secondary structure (Cloverleaf model)
>W141695574	Leu	TAA
                   t      ACCA attcgctcct
                     G + T
                     C - G
                     C - G
                     C - G
                     A - T
                     A - T
                     G - C          T G
                    T     C G C C C     A
      T A A        G      | | | | |     A
    G       G G T G       G C G G G     C
    G         | | |                 T T
    C       A C A C
      A G          G     TGACTTACGTCAT
                    G + T
                    G - C
                    G - C
                    G - C
                    T + G
                  T       C
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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