The detailed information of tRNA gene sequence


Sequence ID>W09112224
Genome IDABXR01000012
Search identical group
Phylum/ClassThermotogota
SpeciesMarinitoga piezophila KA3 [ABXR]
Start position on genome 178
End posion on genome 104
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
acccttggat
tRNA gene sequence 
GGCCCCATAGGATAACGGCCAGTCCGCCGGATTCTCAGTCCGGAGGTCGGGGTTCGATTC
CCCGTGGGGCTGCCA
Downstream region at tRNA end position 
gatgaaatag
Secondary structure (Cloverleaf model)
>W09112224	Glu	CTC
                   t      GCCA gatgaaatag
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T T
                    T     G C C C C     A
      C A A        A      | | | | |     G
    G       T A G G       C G G G G     C
    G       + | | |                 T T
    C       G T C C
      C A          G     AGGT
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  T       G
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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