The detailed information of tRNA gene sequence


Sequence ID>W141696014
Genome IDJMFG01000007
Search identical group
Phylum/ClassAcidobacteriota
SpeciesThermoanaerobaculum aquaticum [JMFG]
Start position on genome 6067
End posion on genome 6162
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
caatacgcgc
tRNA gene sequence 
GGAAGCGCACGGGGCCTGGTGGCCCTCGCGGTCTTCAAAACCGTTGCCCGGCCGCACCAG
GCGGTCGGGGGTGGGTTCGATTCCCATGCGCTTCCGgaa
Downstream region at tRNA end position 
ctcttttggc
Secondary structure (Cloverleaf model)
>W141696014	SeC(p)	TCA
                   c      Ggaa ctcttttggc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C
                     C - G          T T
                    A     T A C C C     A
      T C C        C      + | | | |     G
    G       G G G G       G T G G G     C
    G       | | | +                 T T
    T       C C C T
      G G          C     TGCCCGGCCGCACCAGGCGGTCGGGG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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