The detailed information of tRNA gene sequence


Sequence ID>W141710711
Genome IDJMPO01000019
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesRahnella aquatilis CIP 78.65 = ATCC 33071 [JMPO]
Start position on genome 1085
End posion on genome 1172
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gcttcgttgc
tRNA gene sequence 
GGAGGGGTGGCCGAGCGGCTGAAGGCACCGGTCTTGAAAACCGGCGATGGGAAACCATTC
GAGAGTTCGAATCTCTCCTCCTCCGCCA
Downstream region at tRNA end position 
taaacaacac
Secondary structure (Cloverleaf model)
>W141710711	Ser	TGA
                   c      GCCA taaacaacac
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G + T
                     G - C          T A
                    T     C T C T C     A
      C G A        G      | | | | |     G
    G       G C C G       G A G A G     C
    G         | | |                 T T
    C       A G G C
      T G A        A     CGATGGGAAACCATTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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