The detailed information of tRNA gene sequence


Sequence ID>W09102742
Genome IDAAIG01000003
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesJannaschia sp. CCS1 [AAIG]
Start position on genome 50737
End posion on genome 50664
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
cttgcttcga
tRNA gene sequence 
GGCGAGTTGGCGGAGTGGTTACGCAGCGGATTGCAAATCCGTGTACACCGGTTCGATTCC
GGTACTCGCCTCCA
Downstream region at tRNA end position 
tttggtatca
Secondary structure (Cloverleaf model)
>W09102742	Cys	GCA
                   a      TCCA tttggtatca
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     T - A          T T
                    T     T G G C C     A
        G A        G      | | | | |     G
      T     G G C G       A C C G G     C
      G       | | |                 T T
      G     A C G C
        T T        A     GTAC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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