The detailed information of tRNA gene sequence


Sequence ID>W09103444
Genome IDAAJF01000035
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesSyntrophobacter fumaroxidans MPOB [AAJF]
Start position on genome 4254
End posion on genome 4180
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
atcatgttcc
tRNA gene sequence 
GGCGGCATACCCAAGTGGTAAGGGAGCGGTCTGCAAAACCGTTATTCAGCGGTTCAAATC
CGCTTGCCGCCTCCA
Downstream region at tRNA end position 
gaaaaatcaa
Secondary structure (Cloverleaf model)
>W09103444	Cys	GCA
                   c      TCCA gaaaaatcaa
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     A - T          T A
                    T     T C G C C     A
        G A        A      | | | | |     A
      T     A C C C       A G C G G     C
      G       | | |                 T T
      G     A G G G
        T A        A     TATTC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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