The detailed information of tRNA gene sequence


Sequence ID>W141728959
Genome IDJNHH01000009
Search identical group
Phylum/ClassBacteroidota
SpeciesBacteroides fragilis str. 3725 D9 ii [JNHH]
Start position on genome 162877
End posion on genome 162966
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gcgggttcaa
tRNA gene sequence 
GGAAGTTTGGGTGAGTGGCTGAAACCACCAGTTTGCTAAACTGACGTACTCGTAAGGGTA
CCGGGGGTTCGAATCCCCCAGCTTCCGCAA
Downstream region at tRNA end position 
aatctcaaaa
Secondary structure (Cloverleaf model)
>W141728959	Ser	GCT
                   a      GCAA aatctcaaaa
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T + G
                     T - A          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G T G G       G G G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CGTACTCGTAAGGGTACC
                    C   A
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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