The detailed information of tRNA gene sequence


Sequence ID>W141730210
Genome IDJNIE01000004
Search identical group
Phylum/ClassAquificota
SpeciesThermocrinis jamiesonii GBS [JNIE]
Start position on genome 118727
End posion on genome 118810
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
attataatta
tRNA gene sequence 
GCCGGAGTGGCGGAACTGGCAGACGCGGGAGACTCAAAATCTCCTGCCCGCAAGGGCGTG
GGGGTTCGAGTCCCTCCTCCGGCAtaa
Downstream region at tRNA end position 
aaaatgaaaa
Secondary structure (Cloverleaf model)
>W141730210	Leu	CAA
                   a      Ataa aaaatgaaaa
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C T C C C     A
      C A A        G      | + | | |     G
    T       G G C G       G G G G G     C
    G         | | |                 T T
    G       A C G C
      C A G        G     TGCCCGCAAGGGCGT
                    G - C
                    G - C
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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