The detailed information of tRNA gene sequence


Sequence ID>W141730217
Genome IDJNIE01000005
Search identical group
Phylum/ClassAquificota
SpeciesThermocrinis jamiesonii GBS [JNIE]
Start position on genome 1068
End posion on genome 1157
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tatttttgta
tRNA gene sequence 
GGAGAGGTGGCCGAGAGGCCGAAGGCGGCTCCTTGCTAAGGAGTTGTAGGGTTAATAGCC
CTACCGCGGGTTCGAATCCCGCCCTCTCCGttt
Downstream region at tRNA end position 
aatcagtttc
Secondary structure (Cloverleaf model)
>W141730217	Ser	GCT
                   a      Gttt aatcagtttc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      A G A        G      | | | | |     G
    G       G C C G       G C G G G     C
    G         | | |                 T T
    C       A G G C
      C G A        G     TGTAGGGTTAATAGCCCTACC
                    G + T
                    C - G
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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