The detailed information of tRNA gene sequence


Sequence ID>W141731177
Genome IDJNIW01000021
Search identical group
Phylum/ClassDeinococcota
SpeciesDeinococcus frigens DSM 12807 [JNIW]
Start position on genome 26719
End posion on genome 26792
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ttcgggtttt
tRNA gene sequence 
GGCGCTGTAGCCAAGTGGTAAGGCAGAGGTTTGCAAAACCTCCACCACCGGTTCGAGTCC
GGTCAGCGCCTCCA
Downstream region at tRNA end position 
aaccacgccc
Secondary structure (Cloverleaf model)
>W141731177	Cys	GCA
                   t      TCCA aaccacgccc
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     T - A
                     G - C          T G
                    T     T G G C C     A
        G A        A      | | | | |     G
      T     A C C G       A C C G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     CACC
                    G - C
                    A - T
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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