The detailed information of tRNA gene sequence


Sequence ID>W141731799
Genome IDJNJL01000013
Search identical group
Phylum/ClassMycoplasmatota
SpeciesMetamycoplasma cloacale ATCC 35276 [JNJL]
Start position on genome 39847
End posion on genome 39754
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttaatgtttt
tRNA gene sequence 
GGGTAAGTACTCAAGTGGTCGAAGAGGCGGTCCTGCTAAGACTGTAGGGGTGTCTAAAGC
ACCCGCGGAGGTTCAAATCCTCTCTTACCCGCCA
Downstream region at tRNA end position 
tttttttata
Secondary structure (Cloverleaf model)
>W141731799	Ser	GCT
                   t      GCCA tttttttata
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T
                     A - T
                     G - C          T A
                    T     T C T C C     A
      T G A        A      + | | | |     A
    G       A C T C       G G A G G     C
    G         | | |                 T T
    T       A G A G
      C G A        G     TAGGGGTGTCTAAAGCACCCGC
                    C - G
                    G + T
                    G - C
                    T - A
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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