The detailed information of tRNA gene sequence


Sequence ID>W09107127
Genome IDABFI01000007
Search identical group
Phylum/ClassAquificota
SpeciesHydrogenobaculum sp. Y04AAS1 [ABFI]
Start position on genome 14871
End posion on genome 14794
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ttagatggct
tRNA gene sequence 
GGAGCAGTAGTTCAGCCGGCCCAGAACGCCGGCCTGTCACGTCGGAGGTCGCGGGTTCGA
ATCCCGTCTGCTCCGCCA
Downstream region at tRNA end position 
tcttaattaa
Secondary structure (Cloverleaf model)
>W09107127	Asp	GTC
                   t      GCCA tcttaattaa
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     A - T
                     G - C          T A
                    T     T G C C C     A
    C C G A        A      + | | | |     G
  G         C T T G       G C G G G     C
  G         | | | |                 T T
  C         G A A C
    C C A          G     AGGTC
                    C - G
                    C - G
                    G - C
                    G + T
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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