The detailed information of tRNA gene sequence


Sequence ID>W09109122
Genome IDABTW01000003
Search identical group
Phylum/ClassMyxococcota
SpeciesHaliangium ochraceum DSM 14365 [ABTW]
Start position on genome 198562
End posion on genome 198638
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aaacgaatat
tRNA gene sequence 
GGGGCGGTAGTTAAGTCGGTTATAACGCCGGCCTGTCACGCCGGAGGCCGCGGGTTCGAG
TCCCGTCCGCCCCGCTA
Downstream region at tRNA end position 
aaccccggag
Secondary structure (Cloverleaf model)
>W09109122	Asp	GTC
                   t      GCTA aaccccggag
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    C       A T T G       G C G G G     C
    G       | | | |                 T T
    G       T A A C
      T T A        G     AGGCC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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