The detailed information of tRNA gene sequence


Sequence ID>W141738812
Genome IDJNNH01000043
Search identical group
Phylum/ClassAcidithiobacillia
SpeciesAcidithiobacillus ferrooxidans ferriphilum [JNNH]
Start position on genome 9913
End posion on genome 9997
Amino Acid Pseudo
Anticodon GTA
Upstream region at tRNA start position 
cacctttttc
tRNA gene sequence 
GGAGAGTGAGGGATTCGGCAAACCCAGCAGACTGTAAATCTGCCGCCTCTGGCAACGCAC
GGTTCGATTCCGTGGCTCTCCACCA
Downstream region at tRNA end position 
tttttaagct
Secondary structure (Cloverleaf model)
>W141738812	Pseudo	GTA
                   c      ACCA tttttaagct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T + G          T T
                    G     G T G C C     A
      C T T        A      | | | | |     G
    G       A G G G       C A C G G     C
    G         | | |                 T T
    C       A C C C
      A A          A     CGCCTCTGGCAACG
                    G - C
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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