The detailed information of tRNA gene sequence


Sequence ID>W141738814
Genome IDJNNH01000043
Search identical group
Phylum/ClassAcidithiobacillia
SpeciesAcidithiobacillus ferrooxidans ferriphilum [JNNH]
Start position on genome 10825
End posion on genome 10916
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aaccaacaac
tRNA gene sequence 
GGAAGCATGGCAGAGTCCGGTTTATTGCGCCGTCCTCGAAAGACGGAGGTCATGAAAGTG
GTCCACAGGTTCGAATCCTGTTGCTTCCTCCA
Downstream region at tRNA end position 
attttcatgt
Secondary structure (Cloverleaf model)
>W141738814	Ser	CGA
                   c      TCCA attttcatgt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     A - T          T A
                    T     T G T C C     A
    C T G A        G      | | | | |     G
  C         G A C G       A C A G G     C
  G         + | | |                 T T
  G         T T G C
    T T T A        G     AGGTCATGAAAGTGGTCC
                    C - G
                    C - G
                    G - C
                    T - A
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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