The detailed information of tRNA gene sequence


Sequence ID>W09109447
Genome IDABUG01000004
Search identical group
Phylum/ClassDeinococcota
SpeciesAllomeiothermus silvanus DSM 9946 [ABUG]
Start position on genome 220534
End posion on genome 220609
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
agctcgatgt
tRNA gene sequence 
GGGCCTGTAGCTCAGTGGATAGAGCAGCGGCCTTCTAAGCCGTAGGTCGGGCGTTCGAAT
CGCTCCAGGCCCGCCA
Downstream region at tRNA end position 
gtgcagaaca
Secondary structure (Cloverleaf model)
>W09109447	Arg	TCT
                   t      GCCA gtgcagaaca
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     C T C G C     A
      T G A        A      | + | | |     G
    G       C T C G       G G G C G     C
    G       | | | |                 T T
    A       G A G C
      T A          A     AGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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