The detailed information of tRNA gene sequence


Sequence ID>W141776903
Genome IDJOMJ01000004
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesDesulfohalovibrio reitneri L21-Syr-AB [JOMJ]
Start position on genome 191301
End posion on genome 191390
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
tccggaacag
tRNA gene sequence 
GGCGGGCAATCCGGCTCGGTAGCCGGCGCGGTCTTCAAAACCGTTGAATCATTGAGAGAT
GATTAGCAGGTTCGACTCCTGTTGCCCGCCgcca
Downstream region at tRNA end position 
tctttcccat
Secondary structure (Cloverleaf model)
>W141776903	SeC(p)	TCA
                   g      gcca tctttcccat
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T          T C
                    A     T G T C C     A
      C T C        T      + | | | |     G
    G       G G C C       G C A G G     C
    G       | | | |                 T T
    T       C C G G
      A G          C     TGAATCATTGAGAGATGATTA
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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