The detailed information of tRNA gene sequence


Sequence ID>W141776970
Genome IDJOML01000002
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesHydrogenovibrio marinus DSM 11271 [JOML]
Start position on genome 451247
End posion on genome 451337
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cacctgttcc
tRNA gene sequence 
GGTGGACTGGCTGAGTGGTTGAAGGCGGCGGTCTTGAAAACCGTTGTAGGTTAGTAGCCT
ACCTGGGGTTCGAATCCCTAGTCCACCGCCA
Downstream region at tRNA end position 
tttttcaatg
Secondary structure (Cloverleaf model)
>W141776970	Ser	TGA
                   c      GCCA tttttcaatg
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     A - T
                     C - G          T A
                    T     A T C C C     A
      T G A        G      | + | | |     G
    G       G T C G       T G G G G     C
    G         + | |                 T T
    T       A G G C
      T G A        G     TGTAGGTTAGTAGCCTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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