The detailed information of tRNA gene sequence


Sequence ID>W141778828
Genome IDJONI01000004
Search identical group
Phylum/ClassThermotogota
SpeciesPseudothermotoga hypogea DSM 11164 [JONI]
Start position on genome 79170
End posion on genome 79244
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
gttggtgaaa
tRNA gene sequence 
GCGGGTGTAGCTCAATGGTAGAGCATCGGCCTTCCAAGCCGAGGGTTGCGGGTTCGAATC
CCGTCGCCCGCTCCA
Downstream region at tRNA end position 
gcgcccgtag
Secondary structure (Cloverleaf model)
>W141778828	Gly	TCC
                   a      TCCA gcgcccgtag
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C          T A
                    T     T G C C C     A
        A A        A      + | | | |     G
      T     C T C G       G C G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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