The detailed information of tRNA gene sequence


Sequence ID>W141778860
Genome IDJONI01000005
Search identical group
Phylum/ClassThermotogota
SpeciesPseudothermotoga hypogea DSM 11164 [JONI]
Start position on genome 75603
End posion on genome 75527
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ttaacgtggt
tRNA gene sequence 
CGGGGCGTAGCGCAGACGGCAAGCGCGCCTGCCTTGGGAGCAGGAGGTCGCTGGTTCAAG
TCCAGTCGCCCCGACCA
Downstream region at tRNA end position 
attttatttg
Secondary structure (Cloverleaf model)
>W141778860	Pro	TGG
                   t      ACCA attttatttg
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     T G A C C     A
      A G A        A      + | | | |     A
    C       C G C G       G C T G G     C
    G       | | | |                 T T
    G       G C G C
      C A A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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