The detailed information of tRNA gene sequence


Sequence ID>W141779000
Genome IDJONL01000003
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesMaridesulfovibrio frigidus DSM 17176 [JONL]
Start position on genome 230343
End posion on genome 230434
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttttgcgttt
tRNA gene sequence 
GGAGAGGTGGCAGAGTCCGGTTGAACGCGGTAGTCTTGAAAACTATTGAGGGTGTGAGCC
CTCCGGGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
tatttcatat
Secondary structure (Cloverleaf model)
>W141779000	Ser	TGA
                   t      GCCA tatttcatat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    C T G A        G      | + | | |     G
  C         G A C G       G G G G G     C
  G             | |                 T T
  G         A C G C
    T T G A        G     TGAGGGTGTGAGCCCTCC
                    G + T
                    T - A
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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