The detailed information of tRNA gene sequence


Sequence ID>W141779082
Genome IDJONN01000001
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesSphingomonas astaxanthinifaciens DSM 22298 [JONN]
Start position on genome 253568
End posion on genome 253643
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
ggggccgcga
tRNA gene sequence 
GGGCGCTTAGCTCAGCTGGTAGAGCGCTTCCTTTACACGGAAGATGTCGGCGGTTCGAAC
CCGTCAGCGCCCACCA
Downstream region at tRNA end position 
ccgccgacgc
Secondary structure (Cloverleaf model)
>W141779082	Val	TAC
                   a      ACCA ccgccgacgc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     T - A          C A
                    T     C T G C C     A
      C G A        A      | + | | |     G
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     ATGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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